![]() ![]() ![]() The data can be assigned a ProteomeXchange ID. BUT, one or more modifications in the Skyline documents did not have a Unimod Id OR the source files used to build one or more spectral libraries were not uploaded.The source files (spectrum files + search results files) used to build the spectral libraries were uploaded OR there were no spectral libraries.All the modifications used with the Skyline documents had Unimod Ids OR there were no modifications.All the raw data files used with the Skyline documents were uploaded.You will see this status message if the data is valid for a "complete" ProteomeXchange submission. The summary panel at the top of the page displays the validation status and any problems that were found during data validation. The validation process runs as a pipeline job, and the results are displayed after the job is complete. When a dataset is submitted, it is validated for a ProteomeXchange submission. If the Skyline documents include spectral libraries then all the source files (raw + search results) used to build the libraries must be uploaded.All modifications used in the Skyline documents must have Unimod Ids.In addition to the raw data the following are also required for a "complete" ProteomeXchange submission: See Upload Raw Data for details on how to upload raw data. This is the minimum requirement for getting a ProteomeXchange ID. To get a ProteomeXchange ID all the raw data files imported into the Skyline documents must be uploaded. Proteomic datasets submitted to Panorama Public can be assigned a ProteomeXchange ID if they fulfill the ProteomeXchange data guidelines.
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